Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015955000.1_cds_XP_016493686.1_83769
CDS Infomation

[gene=LOC107813001] [db_xref=GeneID:107813001] [protein=probable methyltransferase PMT2] [protein_id=XP_016493686.1] [location=join(3535..4182,4528..4738,5811..6099,6689..7078,8287..8370,8954..9185)] [gbkey=CDS]
Sequence

ATGGCAATAAAAGGAAATCCAGGAGATAACAGAAGCCGAGGTCCGTTGCCAATATTTGTT
GTAGTTGGACTTTGTTGTTTTTTCTATCTTCTAGGAGCATGGCAAAGAAGTGGTTTTGGG
AAGGGAGACAGCATAGCTCTTCAGATGACAAATAAGGCAGAGGACTGCAGCATCCTCTCC
AATCTAGAATATGAAACTCATCATGGTGATCAAAGCGGTACGGTTGATGATCCCAAGCTG
GAAGTCAAGCAGTTTGAGCCTTGTGGTGAGCAATATGTTGATTACACGCCGTGTCATGAT
CAGATGCGAGCAATGACATTTCCTAGAGAAAATATGAACTACAGAGAGAGACATTGCCCT
CCAGAGGAAGAGAAGCTGCATTGTCTTATTCCAGCCCCAAAAGGATATGTGACTCCTTTT
CAATGGCCGAAGAGTCGTGATTACGTACCCTTTGCAAATGCACCACATAAAAGTTTAACA
GTTGAGAAGGCAGTGCAAAACTGGGTCCAATATGAAGGGAATTTATTTAGATTTCCAGGT
GGTGGAACTCAATTCCCACATGGGGCAGATGCATATATTGACCAACTTGCTTCTGTGATC
CCAATGGACAATGGTACAGTTCGAACTGCATTGGATACCGGTTGTGGGGTTGCAAGTTGG
GGTGCATACCTTTTCAAGAAGAATGTTATAGCCATGTCATTCGCACCAAGAGATTCACAT
GAAGCTCAAGTCCAATTTGCTTTGGAAAGAGGTGTGCCAGCCGTTATTGGTGTACTTGGA
ACCGTAAAATTGCCATTTCCATCAAGGGCCTTTGATATGGCTCATTGTTCACGATGTTTG
ATTCCATGGGCTGCAAATGGTGGAATGTACATGATGGAAGTGGATCGCGTGCTCAGACCA
GGGGGGTACTGGATACTTTCAGGTCCTCCCATCAACTGGCGGACTAATTATCAAGCATGG
CAGCGACCTAAAGAGGAGCTGGAAGAGGAACAAAGAATGATTGAAGAGATAGCTGAACTT
CTCTGCTGGGAAAAGAAATATGAGAAAGGTGAGATAGCAATATGGAGAAAACGAGTAAAC
AATGAGTACTGCAGTGAACGAGATTCTCGTGTAACTCTATGTGAATCCTTGAAGTCAGAA
AATGTCTGGTATAAGAAGATGGAGGCATGTGTAACTCTGTATCCTGAAACAACCAATTCT
GATGAAGTTGCTGGTGGAGAGCTCAAGCCATTTCCGGAGAGACTTAATGCTATTCCTCCA
AGAATAGCAAGTGGATCTGTTCCTGGAGTCTCTGTTGACTCATTCCAGGAGGAGGACAAG
TTGTGGAAAAAGCATGTGAAAGCTTATAAGAGAGTTAACAAATTCCTTGACACTGGGAGG
TATCGCAATATACTAGATATGAATGCTGGCCTAGGAAGTTTTGCTGCAGCGCTAGAGTCA
CCTAAACTGTGGGTTATGAATGTTATGCCAACTAAAGCTGAAAGCGACACTCTTGGCGTA
TTATATGAACGAGGCCTGATTGGCATATACCATGACTGGTGTGAAGCCTTCTCTACCTAC
CCTCGGACGTATGACCTTATNAAATTTTCAACTTCCATCTTTTTCTATCTTTTGCTGGAT
CTATGTAATGTTGAAGACATTCTACTAGAGATGGACAGGATTCTTAGACCAGAAGGTGCA
GTTATATTCCGAGATCATGTAGATATTCTTGGCCAAGTAAAACGAATTGCAACTGGTATG
AGGTGGAAGACAAAAACGGTAGATAATGAGGATGGTCCTCTTATTCCAGAAAAGGTTTTG
TTTGCTGTCAAAAGATACTGGGTTGTTGGAGATAACAACTCCACCGCCTTATAG

Peptide Sequence

PEP ID

XP_016493686.1
PEP Infomation

PREDICTED: probable methyltransferase PMT2 [Nicotiana tabacum]
Sequence

MAIKGNPGDNRSRGPLPIFVVVGLCCFFYLLGAWQRSGFGKGDSIALQMTNKAEDCSILS
NLEYETHHGDQSGTVDDPKLEVKQFEPCGEQYVDYTPCHDQMRAMTFPRENMNYRERHCP
PEEEKLHCLIPAPKGYVTPFQWPKSRDYVPFANAPHKSLTVEKAVQNWVQYEGNLFRFPG
GGTQFPHGADAYIDQLASVIPMDNGTVRTALDTGCGVASWGAYLFKKNVIAMSFAPRDSH
EAQVQFALERGVPAVIGVLGTVKLPFPSRAFDMAHCSRCLIPWAANGGMYMMEVDRVLRP
GGYWILSGPPINWRTNYQAWQRPKEELEEEQRMIEEIAELLCWEKKYEKGEIAIWRKRVN
NEYCSERDSRVTLCESLKSENVWYKKMEACVTLYPETTNSDEVAGGELKPFPERLNAIPP
RIASGSVPGVSVDSFQEEDKLWKKHVKAYKRVNKFLDTGRYRNILDMNAGLGSFAAALES
PKLWVMNVMPTKAESDTLGVLYERGLIGIYHDWCEAFSTYPRTYDLXKFSTSIFFYLLLD
LCNVEDILLEMDRILRPEGAVIFRDHVDILGQVKRIATGMRWKTKTVDNEDGPLIPEKVL
FAVKRYWVVGDNNSTAL

Transcript Sequence

Gene sequence data has not been registered.